Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950791.1_cds_XP_016491086.1_81443
CDS Infomation

[gene=LOC107810778] [db_xref=GeneID:107810778] [protein=serine/threonine-protein kinase EDR1-like isoform X3] [protein_id=XP_016491086.1] [location=complement(join(40880..40964,41405..41561,41672..41691,41778..41901,44579..44864,45247..45361,45690..45776,48801..48896,49653..49742,49902..50021,50208..50467,50643..50834,51240..51443,52649..52897))] [gbkey=CDS]
Sequence

ATGGAAGAGACACGAGATGAAGTTGGGCATTCAGAGCAGAGATCCCCAGGGGCTGCATGG
TGGCCTTCAGATTTCGTCGAAAAGTTTGGATCTGTTACCCTTGATAGTAAAGAAGAAAAT
TTGAGGAATAAGGAACCAAGGGAAAATGAAGTATACGATAGTCTTCCATGTCAGACTGCT
TCACAGATTCTCTGGAAAACTGGAACACTGTCAGAACCAATTCCAAATGGTTTCTACTCT
GTTGCTGCTGAGAAAAGGCTCAAAGAGCTTTTTGAAGATATTCCCACTTTTGATGAACTT
CATTCGCTGGAGCTGGAGGGTTTAAGAGCAGATATTATACTCGTAGATACTGAGAAAGAC
AAGAAGCTTTCTATGTTAAAGCAACTGATTGTTGCACTGGTGAAAGGCTTAAGTTCAAAT
CCTGCAGCTATTATAAAAAAGATAGCTGGATTGGTGTCTGATTTTTACAAACGACCAAAC
TCTGAACTAAGTCCTGCTAAAGCTGCTTCTGATGAAAGCTCTCACATTTCTGACAACCGA
GGCATCCAGATGTTGGGTCAAATAAAGCATGGCTCATGCCGTTCTCGAGCAATATTATTC
AAAGTATTAGCGGATACTATAGGTCTTGAAAGTCGGCTTGTTGTGGGTTTGCCTACTGAA
GGAGCTTCTGATTGTGTAGACTCAGATAAGCATATGTCTGTTATAGTTGTCCTAAATTCT
GTGGAACTGCTTGTCGACCTTATGCGTTTTCCTGGTCAACTTATTCCTCGATCAACCAAG
GCTATTTTCATGACCCACATATCTGCTGCTGGGGAGAGTGATTCTGCAGAAAATGATTCC
TGTGATTCGCCATTGGAGCCTAACAGTCCTCTCTATGGGTTTTCAGAGAGAATTGATCCT
GAGAGTTCTGAGAAAGATGACACCCTTCAATGCCAGAGGAGACTAGAAGCATCTTCAAAT
GCTGCAGGACCTTCATTGAGGAGTATGATGTTGCGGTCTAACACATCAATTGACAGAAAA
TTGAGTTTGTCACATAGCGAACCCAATATTGCTACTGCAGCTTGGAGAAGGAGCAGAAGG
AAAGTTATTACTGAACAAAGGACTGCTAGTTCAAGTCCTGAGCATCCTTCATTTCGAGCA
CGTGCACGGTCTATGCTTAGTGGTGATAACAAAACATTCAGAGATTATTCAGATGATGTT
GCTACATCAAGGTCAACAGGTGCATCAACATCCGAACCACGTAGGTTACGAAGAAGAAGC
ATTAGTATTACTCCAGAAATTGGTGATGACATCGTAAGGGCTGTTCGATCAATGAATGAA
GCACTGAAGCAGAATCGTAGAGAACAAGGGGAAAATAGCTCGCTCCTTCATACTTCAAAT
GACAGAGGCGGGGCATTGGATCATCAAAAAAATGTGTCTGATTTTCACCGTGATGACCAT
GAAATATTGGGTGCACAGTCTTCCTTATTTGCATTGTCAAGGGAGCACATGAACTCCCAG
AAGGCAATATCGTTACCCTCGTCTCCCAATGAATTCAGAAGGCAGGCTCCAGAAAGAAGG
GGGCATGTGAATGATGAAACGGTCTCAACCTGGAATAGGATTCTGGAATCACCAATGTTC
CTGAATAAGCCTCTTCTACCTTTTGAAGAATGGAATATAGACTTCTCAGAGTTGACCGTT
GGCACTCGTGTCGGGATTGGATTCTTTGGGGAAGTTTTTCGTGGTATTTGGAATGGAACT
GATGTTGCTATTAAAGTTTTCCTGGAGCAAGATCTTACAGCGGAAAACATGGAGGACTTC
TGCAATGAGATCTCTATCCTTAGCCGTCTTCGACATCCAAATGTTATATTGTTTCTTGGT
GCATGCACAAAGCCTCCTCGTTTGTCCATGGTTACTGAATACATGGAGATGGGATCTCTA
TATCATTTGATCCATTTAAGTGGTCAAAAGAAGAGACTTAGCTGGCGGAGGAGACTCAAG
ATGCTTCCTGACATATGCAGGACGGGATTTATGATTAGTTTCTTGGTTCTGTTGGCAACT
AAGAGGGTTGATGTGCATACATCGGATGAAGATAGTCCATCGTGA

Peptide Sequence

PEP ID

XP_016491086.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase EDR1-like isoform X3 [Nicotiana tabacum]
Sequence

MEETRDEVGHSEQRSPGAAWWPSDFVEKFGSVTLDSKEENLRNKEPRENEVYDSLPCQTA
SQILWKTGTLSEPIPNGFYSVAAEKRLKELFEDIPTFDELHSLELEGLRADIILVDTEKD
KKLSMLKQLIVALVKGLSSNPAAIIKKIAGLVSDFYKRPNSELSPAKAASDESSHISDNR
GIQMLGQIKHGSCRSRAILFKVLADTIGLESRLVVGLPTEGASDCVDSDKHMSVIVVLNS
VELLVDLMRFPGQLIPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERIDP
ESSEKDDTLQCQRRLEASSNAAGPSLRSMMLRSNTSIDRKLSLSHSEPNIATAAWRRSRR
KVITEQRTASSSPEHPSFRARARSMLSGDNKTFRDYSDDVATSRSTGASTSEPRRLRRRS
ISITPEIGDDIVRAVRSMNEALKQNRREQGENSSLLHTSNDRGGALDHQKNVSDFHRDDH
EILGAQSSLFALSREHMNSQKAISLPSSPNEFRRQAPERRGHVNDETVSTWNRILESPMF
LNKPLLPFEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDF
CNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYHLIHLSGQKKRLSWRRRLK
MLPDICRTGFMISFLVLLATKRVDVHTSDEDSPS

Transcript Sequence

Gene sequence data has not been registered.